DNA Analysis in the Animal Feed Sector

Botanical verification, contamination control and mould identification.

Role of DNA analysis in animal feed quality assurance

DNA-based analytical techniques are applied in species verification, microbiological typing and cross-contamination control. Within the animal feed sector, this offers an additional analytical method when conventional physico-chemical or visual inspections fall short. Application is particularly relevant for processed feed materials, premixes or trace analyses.

TLR performs DNA analyses under ISO/IEC 17025 accreditation (RvA L059). Results are applicable within:

  • GMP+ FSA - BA10, including article 4.1 (fraud prevention and origin verification)
  • SecureFeed - source investigation and risk assessment
  • Supplier audits and product specification checks

Application areas in feed audits and supply chain control

1. Botanical origin verification

  • Identification of declared plant species in feed materials or premixes
  • Applicable in import verification, formulation or suspected undeclared components

Case example:
A calf feed producer engaged TLR after a notification from a retail audit. DNA analysis of a so-called "soy-free" premix revealed the presence of soy residue in low concentration. Traceback investigation identified cross-contamination at the foreign supplier. The batch was downgraded and the procurement protocol tightened with additional batch verification.

2. Mould typing in toxin context

  • DNA typing on isolates of Fusarium, Aspergillus or Penicillium
  • Supports root cause analysis for mycotoxin exceedances (such as aflatoxin B1 or DON)
  • Applicable to samples from raw material analyses, compound feeds or by-products

3. Cross-contamination control during batch change

  • Presence/absence testing at DNA level for unwanted feed materials
  • Suitable for facilities switching between regular and medicinal batches
  • Applicable as a validation tool for flushing procedures and line cleaning

Techniques and detection limits

Method

Application

Typical detection limit

PCR

Presence/absence screening

1-10 copies per reaction

qPCR

Quantification in feed matrices

10¹-10³ copies per sample

Sequencing

Species or strain identification

N/A - based on DNA sequence

Note: Detection is possible at low concentrations, provided DNA integrity is preserved and the analysis matrix is homogeneous. Matrix validation is necessary for high-fat or high-fibre feeds (such as fish meal or alfalfa pellets).

Certification context: GMP+, SecureFeed and export

  • GMP+ FSA (BA10):
    • Article 4.1 requires measures against fraud risks
    • DNA analysis supports botanical verification, particularly for imported raw materials or admixture risk
  • SecureFeed:
    • Verification tool for deviations in audit or monitoring results
    • Supports origin verification of high-risk batches
  • Export and recall management:
    • Reports usable for export certificates and supplier claims
    • Legal usability depends on contractual provisions and auditor acceptance

Accreditation and reporting

  • Analyses performed under ISO/IEC 17025 (RvA L059)
  • Report includes:
    • Positive/negative control
    • Identification level and thresholds
    • Measurement uncertainty where applicable
    • Report available in Dutch or English

Use: internal traceability files, recall investigations, documentation for retailers or exporting supply chains

Conclusion

DNA analysis offers the animal feed industry a robust tool for origin verification, contamination control and risk assessment. Applied within an accredited laboratory framework, this technique aligns seamlessly with the requirements of GMP+, SecureFeed and international supply chain assurance. With correct interpretation and matrix validation, DNA detection supports a systematic approach to feed safety and fraud prevention.

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